Showing : ensembl release • reset
5
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9
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4.3k
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Correct version of EnsDb.Hsapiens for ensembl transcriptome
ensembldb ensembl release rnaseq salmon tximport
7.8 years ago emmak ▴ 20
0
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2
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1.7k
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Txtimport for kallisto on hg38 v87
txtimport deseq2 ensembl release
updated 8.6 years ago by 68k • written 8.6 years ago by ▴ 40
1
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1
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1.5k
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News: Ensembl release 86 is out!
ensembl biomart ensembl release ensembl mart News
9.1 years ago Thomas Maurel ▴ 800
1
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0
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1.6k
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News: Ensembl release 85 is out!
ensembl biomart release85 ensembl release mart News
9.3 years ago Thomas Maurel ▴ 800
4
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9
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3.9k
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News: Ensembl release 84 is out!
ensembl mart release84 biomart ensembl release News
updated 9.6 years ago by ▴ 20 • written 9.7 years ago by ▴ 800
0
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0
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1.9k
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News: Ensembl 83 is out!
ensemble mart ensembl biomart ensembl release News
10.0 years ago amonida ▴ 20
6 results • Page 1 of 1
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Answer: sigDF object in sesame by Kevin Blighe ★ 4.0k
Your interpretation of the column headers in the SigDF object is correct: MG corresponds to the methylated signal intensity in the green ch…
Answer: DESeq2 on non-RNASeq counts data by Kevin Blighe ★ 4.0k
The use of DESeq2 for count data from artificial sequences is acceptable, as the program models counts via a negative binomial distribution…
Answer: After running samtools, the featureCounts command crashed. by Kevin Blighe ★ 4.0k
Hello Rui Tang, The buffer overflow error in featureCounts that you encountered is likely due to a compatibility issue between the Subre…
Answer: Problem with the TMB plot by Kevin Blighe ★ 4.0k
The issue that you describe with the tumor mutational burden (TMB) plots appearing linear and lacking consistent TMB values across samples …
Answer: Highly similar RNA-seq samples in PCA - pooling or technical duplication? by Kevin Blighe ★ 4.0k
There are alternative explanations for why these samples are so similar. The similarity could result from low biological variability in gen…
Votes
Answer: Post translational modifications and phosphoproteomics in limpa?
Answer: Post translational modifications and phosphoproteomics in limpa?
Answer: Identifying differentially expressed genes in individual samples from a large co
Answer: Identifying differentially expressed genes in individual samples from a large co
Bioconductor Seminar Series - Dec 2: Deep-learning Gene Perturbation Effect Prediction
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